DFT Calculations, ADME Analysis and Molecular Docking Studies of the Compound AHTPO With the Digestive Enzyme Trypsin Found in Cold-Adapted Fish Species

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Özet

For the special amine 7-Amino-3-(4-aminophenyl)-5H-thiazolo[3,2-a]pyrimidin-5-one (AHTPO), previously reported experimental biological activities served as the foundation for further studies. Computational chemistry and molecular simulation techniques were subsequently applied to investigate AHTPO. Its interactions with trypsin enzymes derived from cold-adapted fish species were examined. The compound's biological activity and pharmacokinetic properties were assessed using DFT calculations, molecular docking, and ADME analyses. Molecular docking results indicated that AHTPO exhibits strong binding affinities with the 1A0J and 2TBS enzymes, with the binding to 2TBS being energetically more favorable. Additionally, ADME analysis revealed that while the AHTPO shows potential for pharmaceutical applications, its gastrointestinal absorption and blood-brain barrier permeability may present certain limitations. Regarding its electronic and optical properties, AHTPO's high dipole moment and polarizability values enhance its flexibility and adaptability in biological environments. The HOMO-LUMO energy gap suggests that the AHTPO achieves a balance between stability and reactivity, enabling high activity in biomolecular interactions. These findings highlight the promising pharmacological potential of AHTPO in binding with trypsin enzymes, suggesting its viability as a therapeutic agent.

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dc.contributor.authorTanrıverdi, Erdi Anıl
dc.contributor.authorTanrıverdi, Aslıhan Aycan
dc.contributor.authorYıldıko, Ümit
dc.date.accessioned2026-10-29T19:10:04.640353316Z
dc.date.available2026-10-29T19:10:04.640353316Z
dc.date.issued2025
dc.description.abstractFor the special amine 7-Amino-3-(4-aminophenyl)-5H-thiazolo[3,2-a]pyrimidin-5-one (AHTPO), previously reported experimental biological activities served as the foundation for further studies. Computational chemistry and molecular simulation techniques were subsequently applied to investigate AHTPO. Its interactions with trypsin enzymes derived from cold-adapted fish species were examined. The compound's biological activity and pharmacokinetic properties were assessed using DFT calculations, molecular docking, and ADME analyses. Molecular docking results indicated that AHTPO exhibits strong binding affinities with the 1A0J and 2TBS enzymes, with the binding to 2TBS being energetically more favorable. Additionally, ADME analysis revealed that while the AHTPO shows potential for pharmaceutical applications, its gastrointestinal absorption and blood-brain barrier permeability may present certain limitations. Regarding its electronic and optical properties, AHTPO's high dipole moment and polarizability values enhance its flexibility and adaptability in biological environments. The HOMO-LUMO energy gap suggests that the AHTPO achieves a balance between stability and reactivity, enabling high activity in biomolecular interactions. These findings highlight the promising pharmacological potential of AHTPO in binding with trypsin enzymes, suggesting its viability as a therapeutic agent.
dc.identifier.doi10.16984/saufenbilder.1646947
dc.identifier.endpage401
dc.identifier.issn1301-4048
dc.identifier.issue4
dc.identifier.scopus2-s2.0-105015211449
dc.identifier.startpage383
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/bayburt/12810
dc.identifier.volume29
dc.language.isoen
dc.publisherSakarya University
dc.relation.ispartofSakarya University Journal of Science
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectDFT
dc.subjectMolecular docking
dc.subjectPyrimidine
dc.subjectThiazolo
dc.subjectTrypsin
dc.titleDFT Calculations, ADME Analysis and Molecular Docking Studies of the Compound AHTPO With the Digestive Enzyme Trypsin Found in Cold-Adapted Fish Species
dc.typeArticle
rdl.citation.openalex1
rdl.citation.scopus1
rdl.oa.statusgold
rdl.oa.urlhttps://dergipark.org.tr/en/download/article-file/4641300
rdl.scopus.quartileQ4
rdl.source.indexSCOPUS