Synthesis and pharmacokinetic profiling of a novel pyrimidine imidazole based thiosemicarbazone derivative for BRAF inhibition in lung cancer therapy
Özet
This study presents the design, synthesis, and comprehensive evaluation of a novel thiosemicarbazone derivative containing a pyrimidine-imidazole (C11H11N8SCl) as a potential BRAF inhibitor for the treatment of non-small cell lung cancer. The compound was synthesized by a condensation reaction and characterized by elemental analysis, molar conductivity, SEM-EDS, FT-IR, 1H, and 13C-NMR spectral techniques. DFT calculations at the B3LYP/6-311 + + G(d, p) level revealed a HOMO-LUMO gap of 2.8 eV, indicating appropriate molecular stability and reactivity. Molecular docking studies with BRAF (PDB ID: 1UWH) demonstrated favorable binding affinity (-6.85 kcal/mol) with key interactions at ILE512, HIS509, HIS584, GLN529, GLU585, LYS590, VAL510, and LEU587 residues. In vitro cytotoxicity assays revealed that the compound possesses anticancer potential against H-460 cells, with a significant inhibitory effect observed at a concentration of 200 µg/mL. Combined with its favorable binding affinity toward BRAF kinase, these results suggest that the pyrimidine-imidazole thiosemicarbazone may serve as a potential lead scaffold for further development in targeted lung cancer therapy.ADME profiling confirmed the compound’s compliance with Lipinski’s rule of five parameters, supporting its potential as an orally active drug candidate. These findings suggest that our pyrimidine-imidazole thiosemicarbazone represents a promising scaffold for the development of targeted BRAF inhibitors for lung cancer therapy.
Anahtar Kelimeler
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Tam Kayıt
| Alan | Değer | Dil |
|---|---|---|
| dc.contributor.author | Ekincioğlu, Yavuz | |
| dc.contributor.author | Kızıl, Hamit Emre | |
| dc.contributor.author | Güllü, Eda | |
| dc.contributor.author | Özkan, Elvan Hasanoğlu | |
| dc.contributor.author | Nartop, Dilek | |
| dc.date.accessioned | 2026-10-29T19:08:11.956447077Z | |
| dc.date.available | 2026-10-29T19:08:11.956447077Z | |
| dc.date.issued | 2026 | |
| dc.description.abstract | This study presents the design, synthesis, and comprehensive evaluation of a novel thiosemicarbazone derivative containing a pyrimidine-imidazole (C11H11N8SCl) as a potential BRAF inhibitor for the treatment of non-small cell lung cancer. The compound was synthesized by a condensation reaction and characterized by elemental analysis, molar conductivity, SEM-EDS, FT-IR, 1H, and 13C-NMR spectral techniques. DFT calculations at the B3LYP/6-311 + + G(d, p) level revealed a HOMO-LUMO gap of 2.8 eV, indicating appropriate molecular stability and reactivity. Molecular docking studies with BRAF (PDB ID: 1UWH) demonstrated favorable binding affinity (-6.85 kcal/mol) with key interactions at ILE512, HIS509, HIS584, GLN529, GLU585, LYS590, VAL510, and LEU587 residues. In vitro cytotoxicity assays revealed that the compound possesses anticancer potential against H-460 cells, with a significant inhibitory effect observed at a concentration of 200 µg/mL. Combined with its favorable binding affinity toward BRAF kinase, these results suggest that the pyrimidine-imidazole thiosemicarbazone may serve as a potential lead scaffold for further development in targeted lung cancer therapy.ADME profiling confirmed the compound’s compliance with Lipinski’s rule of five parameters, supporting its potential as an orally active drug candidate. These findings suggest that our pyrimidine-imidazole thiosemicarbazone represents a promising scaffold for the development of targeted BRAF inhibitors for lung cancer therapy. | |
| dc.description.sponsorship | Scientific Research Project of Düzce University, (2023.05.03.1407) | |
| dc.identifier.articlenumber | 1218 | |
| dc.identifier.doi | 10.1007/s12672-026-04840-5 | |
| dc.identifier.eissn | 2730-6011 | |
| dc.identifier.issn | 2730-6011 | |
| dc.identifier.issue | 1 | |
| dc.identifier.pmcid | PMC13490358 | |
| dc.identifier.pmid | 42288710 | |
| dc.identifier.scopus | 2-s2.0-105047829627 | |
| dc.identifier.uri | https://rdlopen.rawdatalibrary.net/r/bayburt/11260 | |
| dc.identifier.volume | 17 | |
| dc.identifier.wos | WOS:001854055900005 | |
| dc.language.iso | en | |
| dc.publisher | Springer Science and Business Media B.V. | |
| dc.relation.ispartof | Discover Oncology | |
| dc.rights | info:eu-repo/semantics/openAccess | |
| dc.subject | ADME profiling | |
| dc.subject | BRAF inhibitor | |
| dc.subject | DFT calculations | |
| dc.subject | Molecular docking | |
| dc.subject | Non-small cell lung cancer | |
| dc.subject | Pyrimidine-imidazole based thiosemicarbazone | |
| dc.subject.classification | Oncology | |
| dc.subject.classification | Endocrinology & Metabolism | |
| dc.subject.other | B Raf kinase inhibitor | |
| dc.subject.other | HIS509 | |
| dc.subject.other | HIS584 | |
| dc.subject.other | histidine | |
| dc.subject.other | imidazole | |
| dc.subject.other | LYS590 | |
| dc.subject.other | lysine | |
| dc.subject.other | thiosemicarbazone derivative | |
| dc.subject.other | unclassified drug | |
| dc.subject.other | VAL510 | |
| dc.subject.other | valine | |
| dc.subject.other | Article | |
| dc.subject.other | binding affinity | |
| dc.subject.other | cancer therapy | |
| dc.subject.other | carbon nuclear magnetic resonance | |
| dc.subject.other | cell viability | |
| dc.subject.other | cytotoxicity | |
| dc.subject.other | cytotoxicity assay | |
| dc.subject.other | density functional theory | |
| dc.subject.other | drug design | |
| dc.subject.other | drug development | |
| dc.subject.other | energy dispersive X ray spectroscopy | |
| dc.subject.other | Fourier transform infrared spectroscopy | |
| dc.subject.other | human | |
| dc.subject.other | human cell | |
| dc.subject.other | mass spectrometry | |
| dc.subject.other | molecular docking | |
| dc.subject.other | molecular stability | |
| dc.subject.other | non small cell lung cancer | |
| dc.subject.other | pharmacokinetics | |
| dc.subject.other | physical chemistry | |
| dc.subject.other | proton nuclear magnetic resonance | |
| dc.subject.other | scanning electron microscopy | |
| dc.subject.other | Student t test | |
| dc.title | Synthesis and pharmacokinetic profiling of a novel pyrimidine imidazole based thiosemicarbazone derivative for BRAF inhibition in lung cancer therapy | |
| dc.type | Article | |
| rdl.citation.openalex | 0 | |
| rdl.citation.scopus | 0 | |
| rdl.citation.wos | 0 | |
| rdl.department | Department of Medical Services and Techniques, Program of Opticianry, Vocational School of Health Services, Bayburt University, Bayburt, 69000, Türkiye | |
| rdl.department | Department of Medical Services and Techniques, Program of Laboratory Techniques, Vocational School of Health Services, Bayburt University, Bayburt, 69000, Türkiye | |
| rdl.department | Department of Chemistry, Graduate School of Natural and Applied Sciences, Düzce University, Düzce, 81620, Türkiye | |
| rdl.department | Department of Chemistry, Faculty of Sciences, Gazi University, 06500, Ankara, Türkiye | |
| rdl.department | Department of Chemistry, Faculty of Arts and Sciences, Düzce University, Düzce, 81620, Türkiye | |
| rdl.oa.status | gold | |
| rdl.oa.status | green | |
| rdl.oa.url | https://doi.org/10.1007/s12672-026-04840-5 | |
| rdl.scopus.quartile | Q2 | |
| rdl.sdg | SDG03 | |
| rdl.source.index | SCOPUS | |
| rdl.source.index | WOS | |
| rdl.source.index | PUBMED | |
| rdl.wos.index | Science Citation Index Expanded (SCI-EXPANDED) |

