Theoretical Investigation of (E)-1-(2,4-Dichlorophenyl)-3-[4-(morpholin-4-yl)phenyl]prop-2-en-1-one Molecule As a Possible Potential COVID-19 Drug Candidate: Molecular Docking and DFT Calculations

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Özet

Abstract: In this study, a potential new drug to fight against the COVID-19 virus, (E)-1-(2,4-dichlorophen-yl)-3-[4-(morpholin-4-yl)phenyl]prop-2-en-1-one molecule has been investigated via computational assessment and molecular docking approach. From the conformer analysis and optimization, the most stable structure is determined. For this structure, geometrical parameters, Frontier molecular orbitals analysis, chemical reactivity descriptors, nonlinear optical properties, natural bond orbital, mulliken population analysis, molecular electrostatic potential map and thermodynamic properties of molecule were calculated with standard functional at the B3LYP/6-311++G(d,p) method. The geometric parameters (bond lengths and bond angles) are in good agreement with the experimental values available in the literature. The stability, structural and electronic properties obtained for the molecule can be a significant contribution to the future experimental and theoretical studies. The molecular docking mechanisms between the molecule and 7ALI protein points out that the protein-ligand systems are hydrogen bonding, π-stacking, and hydrophobic interactions.

Anahtar Kelimeler

RDL Kalıcı Bağlantı (PID)
https://rdlopen.rawdatalibrary.net/r/bayburt/12903Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.1134/s0036024423130241Yayıncı resmi DOI adresi
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4
WoS
4
OpenAlex
5
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AlanDeğerDil
dc.contributor.authorEkíncíoğlu, Yavuz
dc.date.accessioned2026-10-29T19:10:12.605332454Z
dc.date.available2026-10-29T19:10:12.605332454Z
dc.date.issued2023
dc.description.abstractAbstract: In this study, a potential new drug to fight against the COVID-19 virus, (E)-1-(2,4-dichlorophen-yl)-3-[4-(morpholin-4-yl)phenyl]prop-2-en-1-one molecule has been investigated via computational assessment and molecular docking approach. From the conformer analysis and optimization, the most stable structure is determined. For this structure, geometrical parameters, Frontier molecular orbitals analysis, chemical reactivity descriptors, nonlinear optical properties, natural bond orbital, mulliken population analysis, molecular electrostatic potential map and thermodynamic properties of molecule were calculated with standard functional at the B3LYP/6-311++G(d,p) method. The geometric parameters (bond lengths and bond angles) are in good agreement with the experimental values available in the literature. The stability, structural and electronic properties obtained for the molecule can be a significant contribution to the future experimental and theoretical studies. The molecular docking mechanisms between the molecule and 7ALI protein points out that the protein-ligand systems are hydrogen bonding, π-stacking, and hydrophobic interactions.
dc.identifier.doi10.1134/s0036024423130241
dc.identifier.eissn1531-863X
dc.identifier.endpage3067
dc.identifier.issn0036-0244
dc.identifier.issue13
dc.identifier.scopus2-s2.0-85179998937
dc.identifier.startpage3057
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/bayburt/12903
dc.identifier.volume97
dc.identifier.wosWOS:001130171900001
dc.language.isoen
dc.publisherPleiades Publishing
dc.relation.ispartofRussian Journal of Physical Chemistry A
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectconformers
dc.subjectDFT
dc.subjectdocking
dc.subjectHOMO–LUMO
dc.subjectNBO
dc.subjectNLO
dc.subject.classificationChemistry, Physical
dc.subject.classificationChemistry
dc.subject.otherCOVID-19
dc.subject.otherElectronic properties
dc.subject.otherGeometry
dc.subject.otherHydrophobicity
dc.subject.otherMolecular modeling
dc.subject.otherMolecular orbitals
dc.subject.otherMolecules
dc.subject.otherNonlinear optics
dc.subject.otherOptical properties
dc.subject.otherProteins
dc.subject.otherStructural properties
dc.subject.otherThermodynamic properties
dc.subject.otherViruses
dc.subject.otherConformer
dc.subject.otherDFT
dc.subject.otherDocking
dc.subject.otherDocking calculations
dc.subject.otherDrug candidates
dc.subject.otherHomo-lumo
dc.subject.otherMolecular docking
dc.subject.otherNBO
dc.subject.otherNLO
dc.subject.otherTheoretical investigations
dc.subject.otherHydrogen bonds
dc.titleTheoretical Investigation of (E)-1-(2,4-Dichlorophenyl)-3-[4-(morpholin-4-yl)phenyl]prop-2-en-1-one Molecule As a Possible Potential COVID-19 Drug Candidate: Molecular Docking and DFT Calculations
dc.typeArticle
rdl.citation.openalex5
rdl.citation.scopus4
rdl.citation.wos4
rdl.oa.statusgreen
rdl.oa.statuspreprint
rdl.oa.urlhttp://hdl.handle.net/20.500.12403/3839
rdl.scopus.quartileQ4
rdl.sdgSDG03
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)