Targeting cov-2 spike rbd and ace-2 interaction with flavonoids of anatolian propolis by in silico and in vitro studies in terms of possible covid-19 therapeutics

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Özet

Propolis is a multi-functional bee product rich in polyphenols. In this study, the inhibitory effect of Anatolian propolis against SARS-coronavirus-2 (SARS-CoV-2) was investigated in vitro and in silico. Raw and commercial propolis samples were used, and both samples were found to be rich in caffeic acid, p-coumaric acid, ferulic acid, t-cinnamic acid, hesperetin, chrysin, pinocembrin, and caffeic acid phenethyl ester (CAPE) at HPLC-UV analysis. Ethanolic propolis extracts (EPE) were used in the ELISA screening test against the spike S1 protein (SARS-CoV-2): ACE-2 interaction for in vitro study. The binding energy values of these polyphenols to the SARS-CoV-2 spike and ACE-2 protein were calculated separately with a molecular docking study using the AutoDock 4.2.6 program. In addition, the pharmacokinetics and drug-likeness properties of these eight polyphenols were calculated according to the SwissADME tool. The binding energy value of pinocembrin was highest in both receptors, followed by chrysin, CAPE, and hesperetin. Based on the in silico modeling and ADME (absorption, distribution, metabolism, and excretion) behaviors of the eight polyphenols, the compounds exhibited the potential ability to act effectively as novel drugs. The findings of both studies showed that propolis has a high inhibitory potential against the Covid-19 virus. However, further studies are now needed.

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https://rdlopen.rawdatalibrary.net/r/bayburt/12160Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.3906/biy-2104-5Yayıncı resmi DOI adresi
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OpenAlex
39
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AlanDeğerDil
dc.contributor.authorGüler, Halil İbrahim
dc.contributor.authorAy Şal, Fulya
dc.contributor.authorCan, Zehra
dc.contributor.authorKara, Yakup
dc.contributor.authorYildiz, Oktay
dc.contributor.authorBeldüz, Ali Osman
dc.contributor.authorÇanakçi, Sabriye
dc.contributor.authorKolayli, Sevgi
dc.date.accessioned2026-10-29T19:09:15.510984183Z
dc.date.available2026-10-29T19:09:15.510984183Z
dc.date.issued2021
dc.description.abstractPropolis is a multi-functional bee product rich in polyphenols. In this study, the inhibitory effect of Anatolian propolis against SARS-coronavirus-2 (SARS-CoV-2) was investigated in vitro and in silico. Raw and commercial propolis samples were used, and both samples were found to be rich in caffeic acid, p-coumaric acid, ferulic acid, t-cinnamic acid, hesperetin, chrysin, pinocembrin, and caffeic acid phenethyl ester (CAPE) at HPLC-UV analysis. Ethanolic propolis extracts (EPE) were used in the ELISA screening test against the spike S1 protein (SARS-CoV-2): ACE-2 interaction for in vitro study. The binding energy values of these polyphenols to the SARS-CoV-2 spike and ACE-2 protein were calculated separately with a molecular docking study using the AutoDock 4.2.6 program. In addition, the pharmacokinetics and drug-likeness properties of these eight polyphenols were calculated according to the SwissADME tool. The binding energy value of pinocembrin was highest in both receptors, followed by chrysin, CAPE, and hesperetin. Based on the in silico modeling and ADME (absorption, distribution, metabolism, and excretion) behaviors of the eight polyphenols, the compounds exhibited the potential ability to act effectively as novel drugs. The findings of both studies showed that propolis has a high inhibitory potential against the Covid-19 virus. However, further studies are now needed.
dc.description.sponsorshipSBS Scientific Bio Solutions Inc.
dc.description.sponsorshipKaradeniz Teknik Üniversitesi, KTU, (BAP FBA-2020-9192)
dc.description.sponsorshipKaradeniz Teknik Üniversitesi, KTU
dc.identifier.doi10.3906/biy-2104-5
dc.identifier.eissn1303-6092
dc.identifier.endpage548
dc.identifier.issn1300-0152
dc.identifier.issueSpecial Issue 1
dc.identifier.pmcidPMC8576337
dc.identifier.pmid34803452
dc.identifier.scopus2-s2.0-85114247491
dc.identifier.startpage530
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/bayburt/12160
dc.identifier.volume45
dc.identifier.wosWOS:000691376800014
dc.language.isoen
dc.publisherTUBITAK
dc.relation.ispartofTurkish Journal of Biology
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectCovid-19
dc.subjectMolecular docking
dc.subjectPinocembrin
dc.subjectPropolis
dc.subjectSARS-CoV-2
dc.subject.classificationBiology
dc.subject.classificationLife Sciences & Biomedicine - Other Topics
dc.subject.otherANTIOXIDANT ACTIVITY
dc.subject.otherPHENOLIC COMPOSITION
dc.subject.otherCHEMISTRY
dc.subject.otherHONEY
dc.titleTargeting cov-2 spike rbd and ace-2 interaction with flavonoids of anatolian propolis by in silico and in vitro studies in terms of possible covid-19 therapeutics
dc.typeArticle
rdl.citation.openalex39
rdl.citation.scopus35
rdl.citation.trdizin0
rdl.citation.wos29
rdl.departmentDepartment of Molecular Biology and Genetics, Faculty of Science, Karadeniz Technical University, Trabzon Turkey
rdl.departmentDepartment of Biology, Faculty of Science, Karadeniz Technical University, Trabzon Turkey
rdl.departmentSchool of Applied Sciences, Bayburt University, Bayburt Turkey
rdl.departmentDepartment of Chemistry, Faculty of Science, Karadeniz Technical University, Trabzon Turkey
rdl.departmentDepartment of Biochemistry, Faculty of Pharmacy, Basic Pharmaceutical Sciences, Karadeniz Technical University, Trabzon Turkey
rdl.oa.statusgold
rdl.oa.statusgreen
rdl.oa.urlhttps://journals.tubitak.gov.tr/cgi/viewcontent.cgi?article=1055&context=biology
rdl.scopus.quartileQ2
rdl.sdgSDG03
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.source.indexTRDIZIN
rdl.source.indexPUBMED
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)