Molecular Cloning, Expression and Characterisation of a Bacterial Myrosinase from Citrobacter Wye1

MakaleAçık ErişimScopus SJRQ1

Özet

Glucosinolates are plant natural products which on degradation by myrosinases give rise to the beneficial bioactive isothiocyanates. Recently, a myrosinase activity was detected in a Citrobacter strain isolated from soil. This enzyme was purified enabling its amino acid sequence and gene sequence (cmyr) to be determined. In order to study this myrosinase it was necessary to establish an expression system that would enable future work such as a structural determination of the protein to be carried out. The myrosinase gene was amplified, cloned and expressed in Escherichia coli with a 6XHis-tag. The heterologous expression of cmyr enabled relatively large amounts of myrosinase to be produced (3.4 mg cmyr/100 ml culture). Myrosinase activity was determined by mixing substrate and enzyme and determining glucose release. Optimum pH and temperature were determined to be pH 6.0 and 25 °C for the Ni-NTA purified protein. The kinetic parameters of the purified myrosinase were determined using sinigrin as a substrate. Km and Vmax were estimated as 0.18 mM and 0.033 mmol/min/mg respectively for sinigrin under optimum conditions and compared to other kinetic data for myrosinases. The substrate specificity of myrosinase was determined having the highest affinity for sinigrin followed by glucoiberin, progoitrin, glucoerucin, glucoraphanin and glucotropaeolin.

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RDL Kalıcı Bağlantı (PID)
https://rdlopen.rawdatalibrary.net/r/bayburt/13485Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.1007/s10930-021-10034-5Yayıncı resmi DOI adresi
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Scopus
21
WoS
14
OpenAlex
16
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Tam Kayıt
AlanDeğerDil
dc.contributor.authorCebeci, Fatma
dc.contributor.authorMayer, Melinda J.
dc.contributor.authorRossiter, John T.
dc.contributor.authorMithen, Richard
dc.contributor.authorNarbad, Arjan
dc.date.accessioned2026-10-29T19:11:02.225563963Z
dc.date.available2026-10-29T19:11:02.225563963Z
dc.date.issued2022
dc.description.abstractGlucosinolates are plant natural products which on degradation by myrosinases give rise to the beneficial bioactive isothiocyanates. Recently, a myrosinase activity was detected in a Citrobacter strain isolated from soil. This enzyme was purified enabling its amino acid sequence and gene sequence (cmyr) to be determined. In order to study this myrosinase it was necessary to establish an expression system that would enable future work such as a structural determination of the protein to be carried out. The myrosinase gene was amplified, cloned and expressed in Escherichia coli with a 6XHis-tag. The heterologous expression of cmyr enabled relatively large amounts of myrosinase to be produced (3.4 mg cmyr/100 ml culture). Myrosinase activity was determined by mixing substrate and enzyme and determining glucose release. Optimum pH and temperature were determined to be pH 6.0 and 25 °C for the Ni-NTA purified protein. The kinetic parameters of the purified myrosinase were determined using sinigrin as a substrate. Km and Vmax were estimated as 0.18 mM and 0.033 mmol/min/mg respectively for sinigrin under optimum conditions and compared to other kinetic data for myrosinases. The substrate specificity of myrosinase was determined having the highest affinity for sinigrin followed by glucoiberin, progoitrin, glucoerucin, glucoraphanin and glucotropaeolin.
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council, BBSRC, (BB/R012490/1, BB/J004545/1, BB/J004529/1, BB/R012512/1, BBS/OS/GC/000010B)
dc.identifier.doi10.1007/s10930-021-10034-5
dc.identifier.eissn1875-8355
dc.identifier.endpage140
dc.identifier.issn1572-3887
dc.identifier.issue1
dc.identifier.pmid35031980
dc.identifier.scopus2-s2.0-85123125228
dc.identifier.startpage131
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/bayburt/13485
dc.identifier.volume41
dc.identifier.wosWOS:000742585900001
dc.language.isoen
dc.publisherSpringer
dc.relation.ispartofProtein Journal
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectBiotransformation
dc.subjectCitrobacter
dc.subjectGlucosinolate
dc.subjectMyrosinase
dc.subject.classificationBiochemistry & Molecular Biology
dc.subject.otherCitrobacter
dc.subject.otherCloning, Molecular
dc.subject.otherGlucosinolates
dc.subject.otherGlycoside Hydrolases
dc.subject.otherSubstrate Specificity
dc.subject.otheralkaline phosphatase
dc.subject.othergenomic DNA
dc.subject.otherglucobrassicin
dc.subject.otherglucoerucin
dc.subject.otherglucoiberin
dc.subject.othergluconasturtiin
dc.subject.otherglucoraphanin
dc.subject.otherglucotropaeolin
dc.subject.otherisothiocyanic acid derivative
dc.subject.otherkanamycin
dc.subject.otherplant medicinal product
dc.subject.otherprogoitrin
dc.subject.otherrecombinant protein
dc.subject.othersinigrin
dc.subject.otherthioglucosidase
dc.subject.otherunclassified drug
dc.subject.otherglucosinolate
dc.subject.otherglycosidase
dc.subject.otheraffinity chromatography
dc.subject.otheramino acid sequence
dc.subject.otherArticle
dc.subject.otherbacterial strain
dc.subject.otherbacterium culture
dc.subject.otherbiotransformation
dc.subject.othercontrolled study
dc.subject.otherDNA extraction
dc.subject.otherenzyme activity
dc.subject.otherenzyme kinetics
dc.subject.otherenzyme specificity
dc.subject.otherEscherichia coli
dc.subject.othergene amplification
dc.subject.othergene sequence
dc.subject.otherheterologous expression
dc.subject.otherhuman
dc.subject.otherintrinsic clearance
dc.subject.otherkinetic parameters
dc.subject.otherliquid chromatography-mass spectrometry
dc.subject.othermass spectrometry
dc.subject.othermaximum reaction velocity
dc.subject.othermetagenomics
dc.subject.othermolecular cloning
dc.subject.othernonhuman
dc.subject.otherpH
dc.subject.otherplasmid
dc.subject.otherpolymerase chain reaction
dc.subject.otherprotein expression
dc.subject.otherprotein purification
dc.subject.othersequence analysis
dc.subject.othersequence homology
dc.subject.othertemperature
dc.subject.otherultra performance liquid chromatography
dc.subject.othervirus load
dc.subject.otherWestern blotting
dc.subject.otherchemistry
dc.subject.othergenetics
dc.subject.othermetabolism
dc.titleMolecular Cloning, Expression and Characterisation of a Bacterial Myrosinase from Citrobacter Wye1
dc.typeArticle
rdl.citation.openalex16
rdl.citation.scopus21
rdl.citation.wos14
rdl.departmentFood Innovation and Health Institute Strategic Programme, Quadram Institute Bioscience, Norwich, UK
rdl.departmentDepartment of Nutrition and Dietetics, Bayburt University, Bayburt, Turkey
rdl.departmentGut Microbes and Health Institute Strategic Programme, Quadram Institute Bioscience, Norwich, UK
rdl.departmentDepartment of Life Sciences, Imperial College London, London, UK
rdl.departmentLiggins Institute, The University of Auckland, Auckland, New Zealand
rdl.oa.statusgreen
rdl.oa.statuspreprint
rdl.oa.urlhttp://hdl.handle.net/20.500.12403/3502
rdl.scopus.quartileQ1
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.source.indexPUBMED
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)