Molecular Cloning, Expression and Characterisation of a Bacterial Myrosinase from Citrobacter Wye1
Özet
Glucosinolates are plant natural products which on degradation by myrosinases give rise to the beneficial bioactive isothiocyanates. Recently, a myrosinase activity was detected in a Citrobacter strain isolated from soil. This enzyme was purified enabling its amino acid sequence and gene sequence (cmyr) to be determined. In order to study this myrosinase it was necessary to establish an expression system that would enable future work such as a structural determination of the protein to be carried out. The myrosinase gene was amplified, cloned and expressed in Escherichia coli with a 6XHis-tag. The heterologous expression of cmyr enabled relatively large amounts of myrosinase to be produced (3.4 mg cmyr/100 ml culture). Myrosinase activity was determined by mixing substrate and enzyme and determining glucose release. Optimum pH and temperature were determined to be pH 6.0 and 25 °C for the Ni-NTA purified protein. The kinetic parameters of the purified myrosinase were determined using sinigrin as a substrate. Km and Vmax were estimated as 0.18 mM and 0.033 mmol/min/mg respectively for sinigrin under optimum conditions and compared to other kinetic data for myrosinases. The substrate specificity of myrosinase was determined having the highest affinity for sinigrin followed by glucoiberin, progoitrin, glucoerucin, glucoraphanin and glucotropaeolin.
Anahtar Kelimeler
- Scopus
- 21
- WoS
- 14
- OpenAlex
- 16
Tam Kayıt
| Alan | Değer | Dil |
|---|---|---|
| dc.contributor.author | Cebeci, Fatma | |
| dc.contributor.author | Mayer, Melinda J. | |
| dc.contributor.author | Rossiter, John T. | |
| dc.contributor.author | Mithen, Richard | |
| dc.contributor.author | Narbad, Arjan | |
| dc.date.accessioned | 2026-10-29T19:11:02.225563963Z | |
| dc.date.available | 2026-10-29T19:11:02.225563963Z | |
| dc.date.issued | 2022 | |
| dc.description.abstract | Glucosinolates are plant natural products which on degradation by myrosinases give rise to the beneficial bioactive isothiocyanates. Recently, a myrosinase activity was detected in a Citrobacter strain isolated from soil. This enzyme was purified enabling its amino acid sequence and gene sequence (cmyr) to be determined. In order to study this myrosinase it was necessary to establish an expression system that would enable future work such as a structural determination of the protein to be carried out. The myrosinase gene was amplified, cloned and expressed in Escherichia coli with a 6XHis-tag. The heterologous expression of cmyr enabled relatively large amounts of myrosinase to be produced (3.4 mg cmyr/100 ml culture). Myrosinase activity was determined by mixing substrate and enzyme and determining glucose release. Optimum pH and temperature were determined to be pH 6.0 and 25 °C for the Ni-NTA purified protein. The kinetic parameters of the purified myrosinase were determined using sinigrin as a substrate. Km and Vmax were estimated as 0.18 mM and 0.033 mmol/min/mg respectively for sinigrin under optimum conditions and compared to other kinetic data for myrosinases. The substrate specificity of myrosinase was determined having the highest affinity for sinigrin followed by glucoiberin, progoitrin, glucoerucin, glucoraphanin and glucotropaeolin. | |
| dc.description.sponsorship | Biotechnology and Biological Sciences Research Council, BBSRC, (BB/R012490/1, BB/J004545/1, BB/J004529/1, BB/R012512/1, BBS/OS/GC/000010B) | |
| dc.identifier.doi | 10.1007/s10930-021-10034-5 | |
| dc.identifier.eissn | 1875-8355 | |
| dc.identifier.endpage | 140 | |
| dc.identifier.issn | 1572-3887 | |
| dc.identifier.issue | 1 | |
| dc.identifier.pmid | 35031980 | |
| dc.identifier.scopus | 2-s2.0-85123125228 | |
| dc.identifier.startpage | 131 | |
| dc.identifier.uri | https://rdlopen.rawdatalibrary.net/r/bayburt/13485 | |
| dc.identifier.volume | 41 | |
| dc.identifier.wos | WOS:000742585900001 | |
| dc.language.iso | en | |
| dc.publisher | Springer | |
| dc.relation.ispartof | Protein Journal | |
| dc.rights | info:eu-repo/semantics/openAccess | |
| dc.subject | Biotransformation | |
| dc.subject | Citrobacter | |
| dc.subject | Glucosinolate | |
| dc.subject | Myrosinase | |
| dc.subject.classification | Biochemistry & Molecular Biology | |
| dc.subject.other | Citrobacter | |
| dc.subject.other | Cloning, Molecular | |
| dc.subject.other | Glucosinolates | |
| dc.subject.other | Glycoside Hydrolases | |
| dc.subject.other | Substrate Specificity | |
| dc.subject.other | alkaline phosphatase | |
| dc.subject.other | genomic DNA | |
| dc.subject.other | glucobrassicin | |
| dc.subject.other | glucoerucin | |
| dc.subject.other | glucoiberin | |
| dc.subject.other | gluconasturtiin | |
| dc.subject.other | glucoraphanin | |
| dc.subject.other | glucotropaeolin | |
| dc.subject.other | isothiocyanic acid derivative | |
| dc.subject.other | kanamycin | |
| dc.subject.other | plant medicinal product | |
| dc.subject.other | progoitrin | |
| dc.subject.other | recombinant protein | |
| dc.subject.other | sinigrin | |
| dc.subject.other | thioglucosidase | |
| dc.subject.other | unclassified drug | |
| dc.subject.other | glucosinolate | |
| dc.subject.other | glycosidase | |
| dc.subject.other | affinity chromatography | |
| dc.subject.other | amino acid sequence | |
| dc.subject.other | Article | |
| dc.subject.other | bacterial strain | |
| dc.subject.other | bacterium culture | |
| dc.subject.other | biotransformation | |
| dc.subject.other | controlled study | |
| dc.subject.other | DNA extraction | |
| dc.subject.other | enzyme activity | |
| dc.subject.other | enzyme kinetics | |
| dc.subject.other | enzyme specificity | |
| dc.subject.other | Escherichia coli | |
| dc.subject.other | gene amplification | |
| dc.subject.other | gene sequence | |
| dc.subject.other | heterologous expression | |
| dc.subject.other | human | |
| dc.subject.other | intrinsic clearance | |
| dc.subject.other | kinetic parameters | |
| dc.subject.other | liquid chromatography-mass spectrometry | |
| dc.subject.other | mass spectrometry | |
| dc.subject.other | maximum reaction velocity | |
| dc.subject.other | metagenomics | |
| dc.subject.other | molecular cloning | |
| dc.subject.other | nonhuman | |
| dc.subject.other | pH | |
| dc.subject.other | plasmid | |
| dc.subject.other | polymerase chain reaction | |
| dc.subject.other | protein expression | |
| dc.subject.other | protein purification | |
| dc.subject.other | sequence analysis | |
| dc.subject.other | sequence homology | |
| dc.subject.other | temperature | |
| dc.subject.other | ultra performance liquid chromatography | |
| dc.subject.other | virus load | |
| dc.subject.other | Western blotting | |
| dc.subject.other | chemistry | |
| dc.subject.other | genetics | |
| dc.subject.other | metabolism | |
| dc.title | Molecular Cloning, Expression and Characterisation of a Bacterial Myrosinase from Citrobacter Wye1 | |
| dc.type | Article | |
| rdl.citation.openalex | 16 | |
| rdl.citation.scopus | 21 | |
| rdl.citation.wos | 14 | |
| rdl.department | Food Innovation and Health Institute Strategic Programme, Quadram Institute Bioscience, Norwich, UK | |
| rdl.department | Department of Nutrition and Dietetics, Bayburt University, Bayburt, Turkey | |
| rdl.department | Gut Microbes and Health Institute Strategic Programme, Quadram Institute Bioscience, Norwich, UK | |
| rdl.department | Department of Life Sciences, Imperial College London, London, UK | |
| rdl.department | Liggins Institute, The University of Auckland, Auckland, New Zealand | |
| rdl.oa.status | green | |
| rdl.oa.status | preprint | |
| rdl.oa.url | http://hdl.handle.net/20.500.12403/3502 | |
| rdl.scopus.quartile | Q1 | |
| rdl.source.index | SCOPUS | |
| rdl.source.index | WOS | |
| rdl.source.index | PUBMED | |
| rdl.wos.index | Science Citation Index Expanded (SCI-EXPANDED) |
